p-value: | 1e-13 |
log p-value: | -3.045e+01 |
Information Content per bp: | 1.844 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 42.0 +/- 26.8bp |
Average Position of motif in Background | 51.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCCSTSCWKTAWKT BNTGDCCTTG-------- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 2 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCCSTSCWKTAWKT TTGGCA----------- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCCSTSCWKTAWKT NTTGGCANN--------- |
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Arx/MA0874.1/Jaspar
Match Rank: | 4 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGGCCSTSCWKTAWKT------ -----GTCCATTAATTAATGGA |
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PH0003.1_Arx/Jaspar
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | TGGCCSTSCWKTAWKT------ -----GTCCATTAATTAATGGA |
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PH0055.1_Hoxa7_2/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGGCCSTSCWKTAWKT----- -----TNCCATTAATTACTNC |
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PH0090.1_Lbx2/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TGGCCSTSCWKTAWKT------- ------TGCATTAATTAATGCGA |
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PH0062.1_Hoxb7/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGGCCSTSCWKTAWKT----- -----TNNCATTAATTANTNC |
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Nr5a2/MA0505.1/Jaspar
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCCSTSCWKTAWKT GCTGACCTTGAACTN--- |
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PH0030.1_Esx1/Jaspar
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGGCCSTSCWKTAWKT------- ------TCNATTAATTAATNNAN |
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