Information for 14-GAATGAAGCTAAT (Motif 20)

A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T C G T A A C T G A G T C A C G T A C G T A G T C G T C A A G C T A C G T A G T C
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 15.9bp
Average Position of motif in Background46.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAATGAAGCTAAT
---NGAAGC----
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATGAAGCTAAT--
--ATTATGCTAATTT
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAATGAAGCTAAT---
----TATGCWAATBAV
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAATGAAGCTAAT---
----WATGCAAATGAG
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAATGAAGCTAAT
ACTATGAATGAATGAT--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAATGAAGCTAAT-
--AATATGCAAATT
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T
A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU1F1/MA0784.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAATGAAGCTAAT---
--AATATGCAAATTAG
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAATGAAGCTAAT--
---TTATGCAAATTA
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAATGAAGCTAAT
CAAAATCGAAACTAA-
 A C G T A C G T A C G T A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAATGAAGCTAAT--
---TTATGCAAATTA
 A C T G C G T A C T G A A C G T A C T G C G T A C G T A A C T G A G T C C G A T C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A