Information for 14-CATTTACAAT (Motif 17)

A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
Reverse Opposite:
T G C A G A C T A C G T T A C G A G C T G C T A G C T A C G T A C G A T T A C G
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.652
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.05%
Number of Background Sequences with motif965.9
Percentage of Background Sequences with motif2.14%
Average Position of motif in Targets49.9 +/- 27.0bp
Average Position of motif in Background49.2 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CATTTACAAT
-GTAAACAAT
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATTTACAAT
CTCATTTGCATW
 A C G T A C G T A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CATTTACAAT
---NAACAAT
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTTACAAT-
TTCATTTGCATAT
 A C G T A C G T A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATTTACAAT
NNCAATTANN--
 A C G T A C G T A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CATTTACAAT---
----GACAATGNN
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTTACAAT----
GCTAATTATAATTATC
 A C G T A C G T A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATTTACAAT-----
NNNTAACAATTATAN
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CATTTACAAT
----AACAAT
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CATTTACAAT
NTTTTACGAC
 A T G C G C T A G C A T C G A T C G A T T C G A A T G C T G C A C T G A A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C