Information for 13-CTAATAGATC (Motif 15)

G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
Reverse Opposite:
T C A G T G C A C A G T A G T C A G C T T G C A A G C T G A C T C T G A C A T G
p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.660
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif551.4
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets54.5 +/- 28.1bp
Average Position of motif in Background49.9 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTAATAGATC
CTAATCGNT-
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTAATAGATC--
CCTTAATNGNTTTT
 A C G T A C G T G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAATAGATC
CTAATKGV--
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAATAGATC-
-TAATCGATAA
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAATAGATC-
-TAATCGATTA
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C A C G T
A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAATAGATC-
-TAATCGATAA
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAATAGATC
NTAATKGTTT
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTAATAGATC
CCYMATAAAA-
 A C G T G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAATAGATC-
-TAATTGATTA
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C A C G T
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTAATAGATC
CCAATAAAAA
 G T A C G A C T C T G A T C G A A C G T T C G A T C A G G T C A A C G T A G T C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A