Information for 18-GCTCATTTGC (Motif 31)

A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A C G T A G T C A A C G T A C T G C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.631e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets29.6 +/- 23.5bp
Average Position of motif in Background46.6 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTCATTTGC---
-CTCATTTGCATW
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCTCATTTGC-----
-CTAATTTGCATATT
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTCATTTGC----
-TTCATTTGCATAT
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCTCATTTGC---
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCTCATTTGC-
-CCGATTGGCT
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTCATTTGC------
TNTAATTTGCATANNN
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCTCATTTGC---
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTCATTTGC------
TNTAATTTGCATACNA
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTCATTTGC------
TNTAATTTGCATACNA
 A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCATTTGC
AGCTCATTAT-
 A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C T G A T G C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T