Information for 22-TGSCCWCCMCAGR (Motif 28)

A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
Reverse Opposite:
A G T C A G T C A G C T A C T G A C G T A C T G A C T G C G A T A T C G A C T G A T C G A G T C C G T A
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets32.6 +/- 21.3bp
Average Position of motif in Background62.4 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGSCCWCCMCAGR
ATGCCCACC-----
 A C G T A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGSCCWCCMCAGR--
ATCCCCGCCCCTAAAA
 A C G T A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGSCCWCCMCAGR-
--NWAACCACADNN
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGSCCWCCMCAGR
---AAACCACAGC
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGSCCWCCMCAGR
-GGCGACCACCGA
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGSCCWCCMCAGR-
---AAACCACAGAN
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF740/MA0753.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGSCCWCCMCAGR
--CCCCCCCCAC-
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGSCCWCCMCAGR
-------CACAGN
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGSCCWCCMCAGR
--NAAACCACAG-
 A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGSCCWCCMCAGR
ATGCCAACC-----
 A C G T A C G T A C T G A T G C A G T C A T G C C G T A A G T C G T A C G T C A A G T C C T G A A C T G C T A G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T