Information for 9-AGGTCGCCGCTCAGGG (Motif 5)

C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
Reverse Opposite:
T A G C G A T C A G T C G A C T A T C G C T G A T A C G A G T C A T C G T A C G G T A C T C A G T C G A A T G C G T A C G A C T
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.629
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif136.7
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.4 +/- 23.8bp
Average Position of motif in Background50.7 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGGTCGCCGCTCAGGG---
-----GCCGCGCAGTGCGT
 C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGTCGCCGCTCAGGG
GAGGTCAAAGGTCA---
 A C G T C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGTCGCCGCTCAGGG
AAGGTCAC---------
 A C G T C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AGGTCGCCGCTCAGGG---
-------GCCTCAGGGCAT
 C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGGTCGCCGCTCAGGG
----AGCCACTCAAG-
 C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AGGTCGCCGCTCAGGG---
-------SCCTSAGGSCAW
 C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Nr2f6/MA0677.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGGTCGCCGCTCAGGG
GAGGTCAAAGGTCA---
 A C G T C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGGTCGCCGCTCAGGG
AGGGGTCAGAGGTCA---
 A C G T A C G T C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCGCCGCTCAGGG
TCAAGGTCAN---------
 A C G T A C G T A C G T C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGGTCGCCGCTCAGGG---
----NTCGCCTCAGGCAAT
 C T G A A C T G T A C G A C G T A G T C C A T G A T G C A T G C T C A G A G T C A G C T T A G C C T G A T C A G C T A G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T