Information for 19-TTSGCCWCAY (Motif 39)

A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T
Reverse Opposite:
T C G A C G A T A C T G C G T A C T A G A C T G A G T C A T C G C T G A C T G A
p-value:1e-3
log p-value:-8.908e+00
Information Content per bp:1.770
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif205.4
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets60.3 +/- 32.6bp
Average Position of motif in Background51.8 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTSGCCWCAY
-TGACGTCA-
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T
A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTSGCCWCAY-
-TGACGTCATC
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T
A C G T G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A A G C T A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTSGCCWCAY--
NWAACCACADNN
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTSGCCWCAY
-TGACCTYA-
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

JUN/MA0488.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTSGCCWCAY---
ATGACATCATCNN
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTSGCCWCAY-
-TTGCAACATN
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTSGCCWCAY
ATCACCCCAC
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTSGCCWCAY----
NATGACATCATCNNN
 A C G T A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T A C G T A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTSGCCWCAY--
ATGACGTCAYYN
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T A C G T A C G T
T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTSGCCWCAY
ATCACCCCAT
 A G C T A G C T A T G C C T A G A G T C A G T C C G A T A G T C G C T A A G C T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T