Information for 18-GVTTACAGGACAGTCA (Motif 20)

A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
Reverse Opposite:
C G A T A C T G G T C A A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G A T G T C A C G T A A C T G G T A C
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.759
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.3 +/- 16.9bp
Average Position of motif in Background50.3 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GVTTACAGGACAGTCA
----TRAGGTCA----
 A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GVTTACAGGACAGTCA
ANGNAAAGGTCA----
 A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GVTTACAGGACAGTCA
GAGGTCAAAGGTCA----
 A C G T A C G T A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GVTTACAGGACAGTCA
-----CAGGTAAGTAT
 A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GVTTACAGGACAGTCA
---CAAAGGTCAG---
 A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GVTTACAGGACAGTCA
GGGGTCAAAGGTCA----
 A C G T A C G T A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GVTTACAGGACAGTCA
GAGGTCAAAGGTCA----
 A C G T A C G T A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GVTTACAGGACAGTCA
GGGGTCAAAGGTCA----
 A C G T A C G T A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GVTTACAGGACAGTCA
GGGGTCAAAGGTCA----
 A C G T A C G T A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GVTTACAGGACAGTCA
------AGGTCA----
 A C T G T A G C C G A T A C G T C G T A G T A C C G T A A C T G A C T G C G T A G T A C C G T A A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T