Information for 8-CASAGCAGGGCAG (Motif 9)

A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
Reverse Opposite:
A G T C C G A T A C T G A T G C A T G C G T A C C G A T A T C G A T G C A G C T A T G C C G A T A C T G
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.756
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif197.0
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets48.0 +/- 26.6bp
Average Position of motif in Background49.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CASAGCAGGGCAG
CACAGCAGGGGG-
 A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CASAGCAGGGCAG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CASAGCAGGGCAG
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CASAGCAGGGCAG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CASAGCAGGGCAG
DCTCAGCAGG----
 A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CASAGCAGGGCAG-
DCHCAGCAGGRGGCC
 A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CASAGCAGGGCAG
--WDNCTGGGCA-
 A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CASAGCAGGGCAG
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CASAGCAGGGCAG
----TNNGGGCAG
 A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CASAGCAGGGCAG
ACATGCCCGGGCAT
 A C G T A G T C C G T A A T C G C T G A A T C G A T G C C G T A A C T G T A C G A T C G G T A C C G T A C T A G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T