Information for 12-CGTGTTACAT (Motif 12)

G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T
Reverse Opposite:
G T C A A C G T A T C G C G A T C G T A C T G A G T A C C G T A A G T C C T A G
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.668
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif864.4
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets49.5 +/- 28.7bp
Average Position of motif in Background51.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGTGTTACAT--
-ANGTTACATAA
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTGTTACAT-
NTTGATACATT
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGTTACAT
GKVTCADRTTWC--
 A C G T A C G T A C G T A C G T G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

TEF/MA0843.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGTGTTACAT----
--TATTACGTAACA
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGTGTTACAT
GKMTCADRTTWC--
 A C G T A C G T A C G T A C G T G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTGTTACAT----
--NGTTACGTAATN
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGTGTTACAT---
---VTTRCATAAY
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTGTTACAT-------
NNTTTTACATGTANNNT
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGTGTTACAT-------
ANTATTACATGTANNNN
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

HLF/MA0043.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTGTTACAT----
--CATTACGTAACC
 G A T C T C A G G C A T C A T G A G C T G C A T G C T A A T G C T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C