Information for 9-CTCATAGGGAGCATCA (Motif 21)

A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G G C T A A C G T A T C G A G T C A C G T A G T C A G T C A G T C A C G T C T G A A C G T A C T G T G C A A C T G
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.2 +/- 20.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCATAGGGAGCATCA
------GGGAGGACNG
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCATAGGGAGCATCA
TGCGCATAGGGGAGGAG-
 A C G T A C G T A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTCATAGGGAGCATCA---
----TAGTGATCATCATTA
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTCATAGGGAGCATCA
------CGGAGC----
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTCATAGGGAGCATCA-
-----AGGAAACAGCTG
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CTCATAGGGAGCATCA---
----ADGGYAGYAGCATCT
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCATAGGGAGCATCA
--AACAGGAAGT----
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CTCATAGGGAGCATCA
TGAATTCCTAGAAAGCA---
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CTCATAGGGAGCATCA
NNNTTAGGTAGCNTNT
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CTCATAGGGAGCATCA-----
----AATGGGGTATCACGTTT
 A G T C A C G T A G T C C G T A A G C T C G T A A C T G A C T G C T A G C G T A A C T G A T G C C G T A C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T