Information for 9-ACATTAGCACCAG (Motif 11)

C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
Reverse Opposite:
T A G C C G A T A C T G C A T G C A G T A C T G G A T C A C G T C G T A C T G A A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.3 +/- 30.6bp
Average Position of motif in Background52.7 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACATTAGCACCAG
ATTTACAGTAGCAAAA-
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACATTAGCACCAG
ATGTACAGTAGCAAAG-
 A C G T A C G T A C G T A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACATTAGCACCAG
--ATTAACACCT-
 C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACATTAGCACCAG
ACTAATTAGC-----
 A C G T A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACATTAGCACCAG
AGTAATTAAC-----
 A C G T A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACATTAGCACCAG
YCATTAMC-----
 C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACATTAGCACCAG
GCTAATTAGC-----
 A C G T A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACATTAGCACCAG----
YTAATTRAWWCCAGATGT
 A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G A C G T A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACATTAGCACCAG
AAATTAGCATAAT
 C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACATTAGCACCAG
CTCATTTGCATW--
 A C G T C G T A G T A C C G T A A G C T C G A T G T C A C T A G T G A C G C T A G A T C G T A C C G T A A C T G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T