Information for 2-CCCCAGGCAA (Motif 6)

T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A
Reverse Opposite:
A G C T C G A T A T C G A G T C A G T C A G C T A C T G C T A G C T A G A T C G
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.851
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif223.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets44.5 +/- 25.6bp
Average Position of motif in Background51.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGCAA
CGCCTCAGGCA-
 A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGCAA
AGCCTCAGGCA-
 A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CCCCAGGCAA-
ATTGCCTGAGGCAAT
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CCCCAGGCAA-
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCCCAGGCAA-
SCCTSAGGSCAW
 A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCCCAGGCAA-
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCCAGGCAA
AGCCTCAGGCA-
 A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCCAGGCAA-
GCCTCAGGGCAT
 A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CCCCAGGCAA-
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAGGCAA
CGCCCCCTGACA-
 A C G T A C G T A C G T T A G C A G T C A G T C A G T C C T G A C T A G A C T G T A G C C G T A T C G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T