Information for 9-CAGATCTCSV (Motif 43)

A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
Reverse Opposite:
A T C G A T G C A T C G C T G A A C T G C G T A A C G T A G T C A C G T A T C G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.810
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif419.4
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets57.3 +/- 27.1bp
Average Position of motif in Background49.7 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CAGATCTCSV---
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGATCTCSV--
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZBTB18/MA0698.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAGATCTCSV
CATCCAGATGTTC-
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGATCTCSV
TCCAGATGTT--
 A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGATCTCSV----
NNAATTCTCGNTNAN
 A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGATCTCSV
ATGCCAGACN----
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGATCTCSV
GAAGATGTT--
 A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGATCTCSV
-AGATAASR-
 A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGATCTCSV
CAAATCACTG
 A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGATCTCSV
AACAGATGGC--
 A C G T A C G T A T G C C G T A A C T G C G T A A C G T A G T C A G C T A T G C T A C G T A G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T