Information for 20-TTKASTWSWTWAKTAW (Motif 39)

A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A T G A C A C G T C G A T C G T A C G A T A T G C C G A T C G T A A T C G A C G T G T C A C G T A C G T A
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.803
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 19.5bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0143.1_Pou2f1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW-----
-----TACTTAATTAATNNAN
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

PH0176.1_Vsx1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---ANTNATTAATTAACTNG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G

PH0069.1_Hoxc4/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---NNTNNTTAATTAATNCG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G

PH0070.1_Hoxc5/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---NNTNATTAATTAATTCG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTKASTWSWTWAKTAW----
---GATTATTAATTAACTTG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

PH0091.1_Lhx1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---NNTTATTAATTAATNCN
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---ANNAGTTAATTAGTTAN
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0059.1_Hoxb4/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---GNTNATTAATTAACNNG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTKASTWSWTWAKTAW----
---NNTTTTTAATTAATTCG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTKASTWSWTWAKTAW----
---AGTTTTTAATTAATTTG
 A C G T A C G T A C G T C G T A A T G C A C G T C G T A T A C G C G T A A C G T C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G