Information for 19-TCAATATTAATGAAGT (Motif 38)

A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C G T A G T C G T C A A C G T A G C T C G T A C G T A A C G T C T G A A C G T A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 21.8bp
Average Position of motif in Background33.0 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCAATATTAATGAAGT-
-AGTTATTAATGAGGTC
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T A C G T
A C G T G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCAATATTAATGAAGT
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCAATATTAATGAAGT
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCAATATTAATGAAGT
--AATATTAATAAAGA
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAATATTAATGAAGT
ATGAATATTCATGAG--
 A C G T A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCAATATTAATGAAGT
---ATATTAATTAA--
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T
A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCAATATTAATGAAGT-
TNATTATTAATTAATTA
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAATATTAATGAAGT-
-TTTAATTAATTAATTC
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T A C G T
A C G T A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAATATTAATGAAGT--
-GAAAATTAATTACTTTG
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T A C G T A C G T
A C G T C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0088.1_Isl2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCAATATTAATGAAGT---
---AAATTAATTGATTTNG
 A C G T A G T C C G T A C G T A A G C T C G T A C G A T A C G T C T G A C G T A A C G T A C T G G T C A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G