Information for 12-AGCTTATAAATGC (Motif 32)

G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T C T G A A C G T C T G A C T G A A T C G A G T C A C G T
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.8 +/- 20.6bp
Average Position of motif in Background43.1 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCTTATAAATGC-----
---GTATAAAAGGCGGGG
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCTTATAAATGC-----
---GTATAAAAGGCGGGG
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCTTATAAATGC
-NGYCATAAAWCH
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTTATAAATGC
-CCYMATAAAA--
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCTTATAAATGC
-NCYAATAAAA--
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTTATAAATGC
-GNCTATAAAAGG
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCTTATAAATGC
-GGCCATAAATCA
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCTTATAAATGC-
AAAGCTCGTAAAATTT
 A C G T A C G T G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCTTATAAATGC-
----GCTAATTGCT
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCTTATAAATGC
--GCAATAAAA--
 G T C A A C T G A T G C A G C T A G C T C G T A A G C T G T C A C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T