Information for 1-AAAGGKTSAGNCT (Motif 3)

C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
Reverse Opposite:
G T C A A C T G A G T C A G T C A C G T A T G C C G T A G T A C A G T C A G T C A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.840
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 27.2bp
Average Position of motif in Background66.4 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGKTSAGNCT
ANGNAAAGGTCA----
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAGGKTSAGNCT
-NTGGGTGTGGCC
 C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAGGKTSAGNCT
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AAAGGKTSAGNCT-
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAGGKTSAGNCT
-AAGCTTG-----
 C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAGGKTSAGNCT
-AGGTGHCAGACA
 C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAAGGKTSAGNCT
--DGGGYGKGGC-
 C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAAGGKTSAGNCT
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AAAGGKTSAGNCT
--TGGGTGTGGCN
 C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----AAAGGKTSAGNCT
GGAGAAAGGTGCGA---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C T A G A C G T A C G T A T C G C G T A A C T G A C T G A G T C A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T