Information for 8-CTGGGAGGAAKAAGVA (Motif 19)

A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
Reverse Opposite:
A G C T A C T G A G T C A C G T A C G T G T A C A C G T G A C T T A G C A G T C A C G T A G T C A G T C A G T C C G T A C T A G
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.754
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.4 +/- 22.9bp
Average Position of motif in Background53.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGAGGAAKAAGVA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGAGGAAKAAGVA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGAGGAAKAAGVA
CSTGGGAAAD-------
 A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGGGAGGAAKAAGVA
--GGGAGGACNG----
 A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGGGAGGAAKAAGVA-----
-AADGAGVCANYASTACAGNC
 A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAGGAAKAAGVA
WDNCTGGGCA---------
 A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGAGGAAKAAGVA
NNNACCGAGAGTNNN-----
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGGGAGGAAKAAGVA
--GGGCGGGAAGG---
 A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTGGGAGGAAKAAGVA
TATTATGGGATGGATAA---
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAGGAAKAAGVA
GTATTGGGTGGGTAATT--
 A C G T A C G T A C G T A G T C C G A T A C T G C T A G A C T G C G T A C T A G A C T G C T G A C G T A A C T G T C G A C G T A A C T G T G A C C T G A
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T