Information for 5-ACAGCGMCTC (Motif 2)

C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
Reverse Opposite:
A T C G G T C A A C T G A C T G A G T C A C T G A G T C A G C T C T A G G C A T
p-value:1e-22
log p-value:-5.067e+01
Information Content per bp:1.763
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif215.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets54.7 +/- 23.1bp
Average Position of motif in Background49.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGMCTC----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACAGCGMCTC----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGMCTC
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGMCTC
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAGCGMCTC
AGCGCGCC--
 C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ACAGCGMCTC
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCGMCTC
CACAGN-----
 A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAGCGMCTC
-CAGCC----
 C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCGMCTC-
TTTGGCGCCAAA
 A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACAGCGMCTC-
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T C G T A A G T C C T G A A C T G G T A C A C T G G T A C T G A C C A G T A T G C A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A