Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-164 | -3.790e+02 | 0.0000 | 204.0 | 24.49% | 810.6 | 1.73% | motif file (matrix) |
svg |
2 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-60 | -1.396e+02 | 0.0000 | 276.0 | 33.13% | 5391.4 | 11.48% | motif file (matrix) |
svg |
3 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-54 | -1.264e+02 | 0.0000 | 438.0 | 52.58% | 12610.8 | 26.84% | motif file (matrix) |
svg |
4 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-27 | -6.270e+01 | 0.0000 | 104.0 | 12.48% | 1670.9 | 3.56% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-24 | -5.626e+01 | 0.0000 | 229.0 | 27.49% | 6485.9 | 13.80% | motif file (matrix) |
svg |
6 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-18 | -4.290e+01 | 0.0000 | 56.0 | 6.72% | 728.1 | 1.55% | motif file (matrix) |
svg |
7 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-15 | -3.621e+01 | 0.0000 | 61.0 | 7.32% | 993.6 | 2.11% | motif file (matrix) |
svg |
8 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-14 | -3.276e+01 | 0.0000 | 61.0 | 7.32% | 1074.1 | 2.29% | motif file (matrix) |
svg |
9 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-13 | -3.142e+01 | 0.0000 | 70.0 | 8.40% | 1396.9 | 2.97% | motif file (matrix) |
svg |
10 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-13 | -3.006e+01 | 0.0000 | 61.0 | 7.32% | 1144.0 | 2.43% | motif file (matrix) |
svg |
11 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-13 | -2.998e+01 | 0.0000 | 63.0 | 7.56% | 1210.9 | 2.58% | motif file (matrix) |
svg |
12 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-12 | -2.960e+01 | 0.0000 | 40.0 | 4.80% | 544.1 | 1.16% | motif file (matrix) |
svg |
13 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-12 | -2.945e+01 | 0.0000 | 66.0 | 7.92% | 1323.5 | 2.82% | motif file (matrix) |
svg |
14 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-12 | -2.895e+01 | 0.0000 | 66.0 | 7.92% | 1338.8 | 2.85% | motif file (matrix) |
svg |
15 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-10 | -2.381e+01 | 0.0000 | 68.0 | 8.16% | 1581.2 | 3.37% | motif file (matrix) |
svg |
16 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-9 | -2.292e+01 | 0.0000 | 51.0 | 6.12% | 1025.2 | 2.18% | motif file (matrix) |
svg |
17 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-9 | -2.259e+01 | 0.0000 | 28.0 | 3.36% | 358.0 | 0.76% | motif file (matrix) |
svg |
18 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-8 | -1.898e+01 | 0.0000 | 50.0 | 6.00% | 1120.8 | 2.39% | motif file (matrix) |
svg |
19 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-7 | -1.822e+01 | 0.0000 | 36.0 | 4.32% | 677.2 | 1.44% | motif file (matrix) |
svg |
20 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-7 | -1.704e+01 | 0.0000 | 26.0 | 3.12% | 406.0 | 0.86% | motif file (matrix) |
svg |
21 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-7 | -1.696e+01 | 0.0000 | 70.0 | 8.40% | 1959.9 | 4.17% | motif file (matrix) |
svg |
22 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-7 | -1.683e+01 | 0.0000 | 23.0 | 2.76% | 328.1 | 0.70% | motif file (matrix) |
svg |
23 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-7 | -1.671e+01 | 0.0000 | 28.0 | 3.36% | 471.2 | 1.00% | motif file (matrix) |
svg |
24 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.519e+01 | 0.0000 | 51.0 | 6.12% | 1307.4 | 2.78% | motif file (matrix) |
svg |
25 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-6 | -1.459e+01 | 0.0000 | 21.0 | 2.52% | 317.4 | 0.68% | motif file (matrix) |
svg |
26 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.208e+01 | 0.0001 | 61.0 | 7.32% | 1869.3 | 3.98% | motif file (matrix) |
svg |
27 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.152e+01 | 0.0001 | 27.0 | 3.24% | 585.0 | 1.25% | motif file (matrix) |
svg |
28 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-4 | -1.142e+01 | 0.0001 | 35.0 | 4.20% | 873.9 | 1.86% | motif file (matrix) |
svg |
29 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-4 | -1.125e+01 | 0.0002 | 34.0 | 4.08% | 843.9 | 1.80% | motif file (matrix) |
svg |
30 |
| RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer | 1e-4 | -1.086e+01 | 0.0002 | 9.0 | 1.08% | 82.0 | 0.17% | motif file (matrix) |
svg |
31 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-4 | -1.055e+01 | 0.0003 | 128.0 | 15.37% | 5047.0 | 10.74% | motif file (matrix) |
svg |
32 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.007e+01 | 0.0005 | 21.0 | 2.52% | 429.1 | 0.91% | motif file (matrix) |
svg |
33 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-4 | -9.967e+00 | 0.0005 | 15.0 | 1.80% | 245.6 | 0.52% | motif file (matrix) |
svg |
34 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.898e+00 | 0.0005 | 8.0 | 0.96% | 71.3 | 0.15% | motif file (matrix) |
svg |
35 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.406e+00 | 0.0009 | 37.0 | 4.44% | 1045.9 | 2.23% | motif file (matrix) |
svg |
36 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-4 | -9.330e+00 | 0.0009 | 41.0 | 4.92% | 1211.0 | 2.58% | motif file (matrix) |
svg |
37 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -8.964e+00 | 0.0013 | 21.0 | 2.52% | 465.7 | 0.99% | motif file (matrix) |
svg |
38 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.931e+00 | 0.0013 | 221.0 | 26.53% | 9948.3 | 21.17% | motif file (matrix) |
svg |
39 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.788e+00 | 0.0014 | 31.0 | 3.72% | 841.1 | 1.79% | motif file (matrix) |
svg |
40 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.074e+00 | 0.0028 | 12.0 | 1.44% | 200.9 | 0.43% | motif file (matrix) |
svg |
41 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-3 | -7.803e+00 | 0.0036 | 17.0 | 2.04% | 367.4 | 0.78% | motif file (matrix) |
svg |
42 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-3 | -7.796e+00 | 0.0036 | 38.0 | 4.56% | 1179.5 | 2.51% | motif file (matrix) |
svg |
43 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-3 | -7.702e+00 | 0.0038 | 97.0 | 11.64% | 3881.2 | 8.26% | motif file (matrix) |
svg |
44 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.461e+00 | 0.0048 | 26.0 | 3.12% | 712.8 | 1.52% | motif file (matrix) |
svg |
45 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -7.372e+00 | 0.0051 | 31.0 | 3.72% | 916.3 | 1.95% | motif file (matrix) |
svg |
46 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -7.163e+00 | 0.0061 | 15.0 | 1.80% | 320.9 | 0.68% | motif file (matrix) |
svg |
47 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.716e+00 | 0.0094 | 38.0 | 4.56% | 1252.8 | 2.67% | motif file (matrix) |
svg |
48 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.502e+00 | 0.0114 | 66.0 | 7.92% | 2540.6 | 5.41% | motif file (matrix) |
svg |
49 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.501e+00 | 0.0114 | 8.0 | 0.96% | 119.6 | 0.25% | motif file (matrix) |
svg |
50 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.459e+00 | 0.0114 | 81.0 | 9.72% | 3259.8 | 6.94% | motif file (matrix) |
svg |
51 |
| NRF(NRF)/Promoter/Homer | 1e-2 | -6.433e+00 | 0.0115 | 15.0 | 1.80% | 345.7 | 0.74% | motif file (matrix) |
svg |
52 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.340e+00 | 0.0124 | 108.0 | 12.97% | 4598.4 | 9.79% | motif file (matrix) |
svg |
53 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -6.286e+00 | 0.0128 | 85.0 | 10.20% | 3474.5 | 7.40% | motif file (matrix) |
svg |
54 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.959e+00 | 0.0174 | 17.0 | 2.04% | 437.2 | 0.93% | motif file (matrix) |
svg |
55 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.955e+00 | 0.0174 | 33.0 | 3.96% | 1091.2 | 2.32% | motif file (matrix) |
svg |
56 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.891e+00 | 0.0180 | 128.0 | 15.37% | 5674.6 | 12.08% | motif file (matrix) |
svg |
57 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.828e+00 | 0.0188 | 68.0 | 8.16% | 2710.5 | 5.77% | motif file (matrix) |
svg |
58 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.780e+00 | 0.0194 | 11.0 | 1.32% | 229.9 | 0.49% | motif file (matrix) |
svg |
59 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.754e+00 | 0.0196 | 127.0 | 15.25% | 5646.7 | 12.02% | motif file (matrix) |
svg |
60 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.700e+00 | 0.0203 | 43.0 | 5.16% | 1555.1 | 3.31% | motif file (matrix) |
svg |
61 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.555e+00 | 0.0231 | 16.0 | 1.92% | 417.3 | 0.89% | motif file (matrix) |
svg |
62 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -5.545e+00 | 0.0231 | 40.0 | 4.80% | 1433.4 | 3.05% | motif file (matrix) |
svg |
63 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -5.259e+00 | 0.0300 | 27.0 | 3.24% | 882.4 | 1.88% | motif file (matrix) |
svg |
64 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -5.225e+00 | 0.0306 | 5.0 | 0.60% | 62.4 | 0.13% | motif file (matrix) |
svg |
65 |
| NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.198e+00 | 0.0309 | 11.0 | 1.32% | 248.9 | 0.53% | motif file (matrix) |
svg |
66 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.184e+00 | 0.0309 | 6.0 | 0.72% | 89.7 | 0.19% | motif file (matrix) |
svg |
67 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.069e+00 | 0.0342 | 62.0 | 7.44% | 2513.7 | 5.35% | motif file (matrix) |
svg |
68 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.067e+00 | 0.0342 | 237.0 | 28.45% | 11566.2 | 24.62% | motif file (matrix) |
svg |
69 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.957e+00 | 0.0371 | 192.0 | 23.05% | 9188.9 | 19.56% | motif file (matrix) |
svg |
70 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.815e+00 | 0.0422 | 52.0 | 6.24% | 2064.7 | 4.39% | motif file (matrix) |
svg |
71 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.777e+00 | 0.0432 | 33.0 | 3.96% | 1184.4 | 2.52% | motif file (matrix) |
svg |
72 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -4.747e+00 | 0.0439 | 91.0 | 10.92% | 3990.9 | 8.49% | motif file (matrix) |
svg |
73 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -4.645e+00 | 0.0479 | 6.0 | 0.72% | 100.4 | 0.21% | motif file (matrix) |
svg |
74 |
| Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -4.641e+00 | 0.0479 | 4.0 | 0.48% | 46.5 | 0.10% | motif file (matrix) |
svg |