Information for 3-GBNVRSSTGACTCASK (Motif 2)

T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
Reverse Opposite:
T G C A A T G C A C G T A C T G C T G A A T C G A G C T A G T C C G T A A T C G A T C G G A C T A T G C A T C G T C G A A T G C
p-value:1e-20
log p-value:-4.792e+01
Information Content per bp:1.569
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif514.1
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets42.5 +/- 22.4bp
Average Position of motif in Background51.5 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.91
Offset:6
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK
------ATGACTCATC
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.90
Offset:5
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK-
-----NATGASTCABNN
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

FOSL2/MA0478.1/Jaspar

Match Rank:3
Score:0.90
Offset:4
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK
----GGATGACTCAT-
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:4
Score:0.90
Offset:5
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK
-----RATGASTCAT-
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.90
Offset:5
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK-
-----NATGACTCATNN
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.90
Offset:4
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK
----GGATGACTCAT-
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:7
Score:0.89
Offset:4
Orientation:reverse strand
Alignment:GBNVRSSTGACTCASK
----NDATGASTCATH
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.89
Offset:6
Orientation:reverse strand
Alignment:GBNVRSSTGACTCASK
------ATGASTCATH
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.89
Offset:5
Orientation:reverse strand
Alignment:GBNVRSSTGACTCASK
-----NATGAGTCACC
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.89
Offset:7
Orientation:forward strand
Alignment:GBNVRSSTGACTCASK
-------TGACTCA--
 T A C G A G C T T A G C T A C G C T G A T A G C T A G C A C G T A C T G C T G A A T G C G A C T G T A C G T C A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T