Information for 6-CATGGGAGCT (Motif 14)

G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
Reverse Opposite:
G C T A C T A G A G T C C G A T A G T C T A G C G T A C G C T A C G A T C A T G
p-value:1e-7
log p-value:-1.691e+01
Information Content per bp:1.666
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.32%
Number of Background Sequences with motif714.7
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets55.4 +/- 23.9bp
Average Position of motif in Background50.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CATGGGAGCT
---CGGAGC-
 G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATGGGAGCT
CSTGGGAAAD
 G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CATGGGAGCT
RGSMTBCTGGGAAAT
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATGGGAGCT
GTCATGTGACC-
 A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CATGGGAGCT
TTGCCATGGCAACN
 A C G T A C G T A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CATGGGAGCT
TTGCCATGGCAACC
 A C G T A C G T A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CATGGGAGCT
TCCCNNGGGACN-
 A C G T A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATGGGAGCT--
CGTGGGTGGTCC
 G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATGGGAGCT
GCCACGTGACC-
 A C G T A C G T G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CATGGGAGCT---
---GGGAGGACNG
 G T A C G C T A C G A T C A T G A T C G T C A G G C T A C T A G G A T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G