p-value: | 1e-6 |
log p-value: | -1.519e+01 |
Information Content per bp: | 1.683 |
Number of Target Sequences with motif | 27.0 |
Percentage of Target Sequences with motif | 3.82% |
Number of Background Sequences with motif | 537.9 |
Percentage of Background Sequences with motif | 1.20% |
Average Position of motif in Targets | 52.4 +/- 24.9bp |
Average Position of motif in Background | 51.1 +/- 38.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.7 |
Multiplicity (# of sites on avg that occur together) | 1.12 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL009.1_DCE_S_II/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG -----GCTGTG-- |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 2 |
Score: | 0.60 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG -------TGCGTG |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GGAGGGCTGYGTG--- ------TTGCGTGCVA |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGAGGGCTGYGTG ----NGCTN---- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG- ------CTGTCTGG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG- ----VBSYGTCTGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGAGGGCTGYGTG------ --NNTNNTGTCTGGNNTNG |
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Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG AGGVNCCTTTGT- |
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KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGAGGGCTGYGTG- --GGGGGTGTGTCC |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 10 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGAGGGCTGYGTG- GTCATGCHTGRCTGS |
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