Information for 16-CACTGACAACCAGTGT (Motif 28)

A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G T C A C G T A C T G A C T G A G C T A G C T A T C G C G A T A G T C C G T A A T C G A C G T A C T G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 17.5bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACTGACAACCAGTGT
-RHTGWCAR-------
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACTGACAACCAGTGT
VGCTGWCAVB------
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CACTGACAACCAGTGT-
-----AAAACCGGTTTT
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CACTGACAACCAGTGT
-SCTGTCAVTCAV---
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CACTGACAACCAGTGT
CAATCACTGGCAGAAT----
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CACTGACAACCAGTGT
-NCTGTCAATCAN---
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CACTGACAACCAGTGT
--TTGACAG-------
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACTGACAACCAGTGT--
-GANGTTAACTAGTTTNN
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CACTGACAACCAGTGT
------AAACCGGTTT
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CACTGACAACCAGTGT---
---------CCATTGTTYB
 A G T C C G T A A T G C A C G T A C T G C G T A A T G C C T G A C T G A A G T C A G T C C G T A A C T G A C G T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G