Information for 10-GGGCACAGCACAGATC (Motif 18)

C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
Reverse Opposite:
T A C G G T C A A G C T T A G C C G A T A T C G C G A T A T C G A G T C A C G T A T C G C G A T C A T G A G T C G A T C A G T C
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.707
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.3 +/- 12.0bp
Average Position of motif in Background66.1 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGCACAGCACAGATC
---CCAGGAACAG---
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGCACAGCACAGATC
TAGGGCAAAGGTCA----
 A C G T A C G T C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCACAGCACAGATC
GGGRAARRGRMCAGMTG
 A C G T C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGGCACAGCACAGATC
----AAACCACAGC--
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGCACAGCACAGATC---
---CGAAGCACACAAAATA
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGCACAGCACAGATC-
-------GCAGTGATTT
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGGCACAGCACAGATC
TGGGGCAAAGGTCA----
 A C G T A C G T C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGGCACAGCACAGATC
--------CACAGN--
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGGCACAGCACAGATC
-----CAGCC------
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGCACAGCACAGATC
TGGAACAGMA------
 C T A G C A T G C T A G G T A C C G T A A T G C C G T A A C T G A T G C C G T A A T G C C G T A A T C G T C G A A C G T A T G C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T