Information for 4-GTGACCTGTTTGT (Motif 4)

T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
Reverse Opposite:
T C G A G T A C G T C A G T C A C G T A T A G C C G T A C T A G A T C G A C G T A G T C G C T A A T G C
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.672
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif369.8
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets47.6 +/- 25.9bp
Average Position of motif in Background47.1 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
GTGACCTT-----
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
-TGACCTYA----
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
-TGACCTTGAT--
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
-TGACCTARTT--
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
-TGACCT------
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCTGTTTGT
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCTGTTTGT
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
-TGACCYCT----
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGACCTGTTTGT
CNNTTGACCTTTG---
 A C G T A C G T A C G T T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGACCTGTTTGT
CTGACCTTTG---
 T A C G C G A T C T A G T C G A T A G C A G T C C G A T A T C G C G A T C A G T C A G T C A T G A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T