Information for 4-YHTYAGCAGGGRKCAG (Motif 10)

A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
Reverse Opposite:
A T G C A C G T A T C G G T C A G A C T G T A C G T A C A G T C C G A T A T C G A G T C G A C T T C A G C G T A C G A T T C A G
p-value:1e-12
log p-value:-2.877e+01
Information Content per bp:1.629
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif126.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets43.9 +/- 22.8bp
Average Position of motif in Background44.6 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG
-CACAGCAGGGGG---
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YHTYAGCAGGGRKCAG
DCHCAGCAGGRGGCC-
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG----
---GGCGAGGGGTCAAGGGC
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG
-------AGRGGTCA-
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG----
---CTCCAGGGGTCAATTGA
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG
------CAAAGGTCAG
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG
---TGTCAGGGGGCG-
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:YHTYAGCAGGGRKCAG----
---NTNNNGGGGTCANGNNN
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YHTYAGCAGGGRKCAG
NAHCAGCTGD------
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:YHTYAGCAGGGRKCAG--
--------GGGAGGACNG
 A G T C G C T A G C A T A G T C C T G A C T A G A T G C G C T A A C T G C A T G C A T G C T G A A C G T T A G C C G T A T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G