Information for 1-DAGGTCABNBTGACCT (Motif 1)

C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
Reverse Opposite:
T C G A C T A G C T A G A C G T A G T C C G T A T A G C T A C G T A C G A C G T T A C G T C G A A G T C G T A C A G C T G C T A
p-value:1e-33
log p-value:-7.696e+01
Information Content per bp:1.660
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif50.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.5 +/- 17.4bp
Average Position of motif in Background62.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:DAGGTCABNBTGACCT-
--GGTCANNGTGACCTN
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:DAGGTCABNBTGACCT-
CAGGTCACCGTGACCTT
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:DAGGTCABNBTGACCT
-AGGTCACCCTGACCT
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--DAGGTCABNBTGACCT--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:DAGGTCABNBTGACCT
-AGGTCA---------
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.65
Offset:10
Orientation:reverse strand
Alignment:DAGGTCABNBTGACCT--
----------TGACCTYA
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-DAGGTCABNBTGACCT
AGRGGTCA---------
 A C G T C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---DAGGTCABNBTGACCT
ATCAAGGTCA---------
 A C G T A C G T A C G T C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:DAGGTCABNBTGACCT-
---------GTGACCTT
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:DAGGTCABNBTGACCT
----TGACCTTGACCT
 C G A T C T G A C A T G A C T G A C G T A T G C G T C A A T G C A T C G A T C G A C G T A C T G T G C A A G T C A G T C A G C T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T