p-value: | 1e-4 |
log p-value: | -1.098e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.67% |
Number of Background Sequences with motif | 10.3 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 43.0 +/- 26.5bp |
Average Position of motif in Background | 33.9 +/- 12.6bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATGGTTGGC CCATTGTTYB- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CATGGTTGGC--- ----NTTGGCANN |
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Hic1/MA0739.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATGGTTGGC-- ---GGTTGGCAT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CATGGTTGGC- -----TTGGCA |
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Sox5/MA0087.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CATGGTTGGC -ATTGTTA-- |
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SOX9/MA0077.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATGGTTGGC CCATTGTTC-- |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGGTTGGC----- NGTAGGTTGGCATNNN |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CATGGTTGGC CCWTTGTYYB- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATGGTTGGC NCCATTGTTC-- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATGGTTGGC--- ---NNTTGGCANN |
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