Information for 13-CTGTGTGTCG (Motif 45)

A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
Reverse Opposite:
A G T C A C T G C T G A A G T C C G T A A G T C C G T A A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.224e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets31.0 +/- 30.4bp
Average Position of motif in Background62.0 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGTCG--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGTCG
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTCG
CTTTGT----
 A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGTCG--
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGTCG-
-TGGGTGTGGC
 A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G A C G T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGTCG
CCTTTGTTTT-
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGTCG
YCTTTGTTCC-
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTCG--
NTGGGTGTGGCC
 A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G A C G T A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTGTGTGTCG
AGGVNCCTTTGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGTCG
CCWTTGTYYB-
 A C G T A G T C A C G T A C T G A C G T A C T G A C G T C T A G A G C T A G T C A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T