Information for 19-TGATCACCGTGCC (Motif 41)

C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C
Reverse Opposite:
C A T G C T A G T A G C C G T A T A G C C T A G C A T G A C G T A T C G C T G A C G A T G T A C C G T A
p-value:1e-6
log p-value:-1.490e+01
Information Content per bp:1.743
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets52.7 +/- 25.8bp
Average Position of motif in Background42.4 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGATCACCGTGCC-
NAGGTCACNNTGACC
 A C G T C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGATCACCGTGCC---
CAGGTCACCGTGACCTT
 A C G T C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGATCACCGTGCC--
AGGTCACCCTGACCT
 C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TGATCACCGTGCC----
--------ATGCCCACC
 C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGATCACCGTGCC-
NNTGTTTATTTTGGCA
 A C G T A C G T C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

Hes2/MA0616.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGATCACCGTGCC----
----GCACGTGTCNNNN
 C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGATCACCGTGCC--
NNNNATGACCTTGANTN
 A C G T A C G T C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCACCGTGCC
TNAGNTGATCAACCGGT-
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGATCACCGTGCC
----GGACGTGC-
 C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGATCACCGTGCC--
----NNACTTGCCTT
 C G A T A C T G C G T A G A C T T A G C T G C A G A T C A G T C A T C G C G A T A C T G G A T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T