Information for 18-KGGSCCAKRGGGG (Motif 40)

A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C A G T C A G T C A G C T T G C A A C G T A C T G A C T G A T G C G T A C A G T C G T C A
p-value:1e-6
log p-value:-1.503e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.8 +/- 22.2bp
Average Position of motif in Background56.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-KGGSCCAKRGGGG
GGGGCCCAAGGGGG
 A C G T A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:KGGSCCAKRGGGG-----
-TGCGCATAGGGGAGGAG
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KGGSCCAKRGGGG-
-TGCCCTGAGGGCA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG-
-TGCCCTNAGGGCA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG-
-TGCCCTNAGGGCA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG-
--TGCCCNGGGGCA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG
WTGSCCTSAGGS-
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG-
NTGCCCANNGGTNA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:KGGSCCAKRGGGG
ATGCCCTGAGGC-
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:KGGSCCAKRGGGG-
TGGGGCAAAGGTCA
 A C G T A C T G A C T G A T C G A G T C A G T C C G T A A C G T C T G A A C T G A C T G A C T G A T C G A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A