Information for 17-ACAGTGACCATCA (Motif 37)

G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T C T A G A C G T
p-value:1e-6
log p-value:-1.571e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.6 +/- 20.2bp
Average Position of motif in Background62.8 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACAGTGACCATCA---
-TAGTGATCATCATTA
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A A C G T A C G T A C G T
A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAGTGACCATCA
---NTGACCTTGA
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACAGTGACCATCA
---ATGACCTTGA
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ACAGTGACCATCA
---GTGACCTT--
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACAGTGACCATCA-
----TGACCTTGAT
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACAGTGACCATCA
--NATGACCTTGA
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACAGTGACCATCA
----TGACCT---
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAGTGACCATCA
-NCGTGACN----
 G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACAGTGACCATCA
TGACCCAGTGACCTAC-
 A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGACCATCA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T G T C A A G T C C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A C G A T A G T C C G T A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T