Information for 15-TGCCTCCTGTGGG (Motif 35)

A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C C G T A A G T C T G C A A C T G A C T G C T G A A C T G A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 19.7bp
Average Position of motif in Background14.2 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTCCTGTGGG-
TNTCCTGCTGTGNNG
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TGCCTCCTGTGGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCCTCCTGTGGG
-ACTTCCTGTT--
 A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTCCTGTGGG
CCCCCTGCTGTG--
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTCCTGTGGG-
TCNCCTGCTGNGNNN
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTCCTGTGGG-
NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGCCTCCTGTGGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TGCCTCCTGTGGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCCTCCTGTGGG
CACTTCCTGT---
 A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGCCTCCTGTGGG
-----GCTGTG--
 A C G T A C T G A G T C A G T C A G C T A G T C A G T C A C G T A C T G A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T