Information for 7-CAGTGGCATT (Motif 27)

A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T
Reverse Opposite:
T G C A T C G A A C G T A T C G A T G C G T A C C G T A G T A C A C G T T A C G
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.832
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.16%
Number of Background Sequences with motif215.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets58.7 +/- 22.7bp
Average Position of motif in Background45.4 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGGCATT
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGTGGCATT
GGTTGGCAT-
 A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGCATT
CTCATTTGCATW
 A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGTGGCATT--
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGCATT-
TTCATTTGCATAT
 A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGGCATT-
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAGTGGCATT-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGTGGCATT---
AACAATAACATTGTT
 A C G T A C G T A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGTGGCATT-
-ATTTGCATAA
 A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T A C G T
A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGTGGCATT
-NTTGGCANN
 A T G C C G T A A C T G C G A T A C T G A T C G A T G C G T C A A G C T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G