Information for 2-CACASMMTGC (Motif 19)

A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
Reverse Opposite:
A C T G T G A C C T G A C A T G A C T G A T G C G A C T A T C G A C G T A C T G
p-value:1e-11
log p-value:-2.570e+01
Information Content per bp:1.731
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif12.48%
Number of Background Sequences with motif2149.5
Percentage of Background Sequences with motif5.25%
Average Position of motif in Targets48.9 +/- 27.1bp
Average Position of motif in Background50.2 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACASMMTGC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACASMMTGC
GGCCACACCCAN-
 A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACASMMTGC-
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACASMMTGC
ACCACATCCTGT
 A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACASMMTGC
GGCCACACCCA--
 A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACASMMTGC
ATCACCCCAT--
 A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CACASMMTGC
TBGCACGCAA---
 A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACASMMTGC
CACGCA----
 A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACASMMTGC
TTCACACCTT--
 A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACASMMTGC
AAACCACAGAN---
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A A T C G G T A C G T A C G A C T A C T G A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T