Information for 13-CAACTRTGGCAACAAA (Motif 18)

G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
Reverse Opposite:
C A G T A G C T A C G T C T A G A C G T A C G T A C T G G T A C A G T C T C G A A G C T C G T A T C A G A C G T C G A T A C T G
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.744
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.4 +/- 19.5bp
Average Position of motif in Background21.5 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC2/MA0846.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAACTRTGGCAACAAA
----TAAGTAAACAAA
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAACTRTGGCAACAAA-
--NCWRWGTAAACANSV
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A A C G T
A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAACTRTGGCAACAAA
--NCTAAGTAAACA--
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAACTRTGGCAACAAA
NNNVCTGWGYAAACASN
 A C G T G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAACTRTGGCAACAAA
----TATGTAAATAT-
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAACTRTGGCAACAAA
----TATGTAAACANG
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAACTRTGGCAACAAA--
---CAAAGTAAACANNNN
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A A C G T A C G T
A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAACTRTGGCAACAAA---
--AAAAAGTAAACAAAGAC
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CAACTRTGGCAACAAA
----------AACAAT
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAACTRTGGCAACAAA
----TATGTAAATAT-
 G T A C C G T A C G T A A G T C A C G T C T G A A C G T T C A G C A T G G T A C G T C A G T C A A G T C C G T A C T G A G C T A
A C G T A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T