Information for 3-CTGGGTCACAGTG (Motif 3)

A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
Reverse Opposite:
A G T C C T G A A T G C C G A T A T C G G A C T A T C G C G T A A G T C A G T C A G T C C T G A A C T G
p-value:1e-28
log p-value:-6.647e+01
Information Content per bp:1.762
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.71%
Number of Background Sequences with motif149.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.9 +/- 26.9bp
Average Position of motif in Background51.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTGGGTCACAGTG---
GTAGGTCACTGGGTCA
 A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGGTCACAGTG----
--AGGTCACCCTGACCT
 A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGGGTCACAGTG
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGGGTCACAGTG-------
GTAGGTCACGGTGACCTACT
 A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

Nfe2l2/MA0150.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGTCACAGTG
TGCTGAGTCATNNTG
 A C G T A C G T A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGGGTCACAGTG---
-NAGGTCACNNTGACC
 A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G A C G T A C G T A C G T
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGGGTCACAGTG-----
-AAGGTCACGGTGACCTG
 A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGGGTCACAGTG
TGCTGAGTCA-----
 A C G T A C G T A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGGGTCACAGTG
AAYTAGGTCA-----
 A C G T A C G T A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGTCACAGTG
NATGAGTCACC---
 A C G T A G T C A G C T C T A G A C T G T C A G G C A T A T G C C T G A A T G C G C T A A T C G G A C T A C T G
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T