Information for 5-CATGACCCTGACCTGA (Motif 15)

A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
Reverse Opposite:
A G C T A G T C C T G A A C T G A C T G C G A T A T G C C G T A C T A G C T A G T A C G C G A T A T G C T C G A G A C T A C T G
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.727
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 25.7bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
--TGACCTTGACCT--
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
--TGACCTTGACCT--
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.68
Offset:8
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
--------TGACCTYA
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
--------TGACCT--
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
-ATGACCTTGAA----
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA--
--------TGACCTTGAT
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
GCTGACCTTGAACTN-
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA----
----NNNNTGACCCGGCGCG
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CATGACCCTGACCTGA
-------GTGACCTT-
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CATGACCCTGACCTGA
------CCTCACCTG-
 A G T C C T G A A G C T T A C G G C T A A T G C A G T C G A T C G C A T A T C G G C T A T G A C A G T C A G C T C T A G T C G A
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T