Information for 5-CTGGCCTGATGVCTVA (Motif 11)

A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
Reverse Opposite:
A C G T A C T G C G T A A T C G A C G T A T G C C G T A A C G T A T G C C G T A C T A G A T C G A G T C A G T C C G T A C T A G
p-value:1e-12
log p-value:-2.880e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.7 +/- 19.6bp
Average Position of motif in Background57.9 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGGCCTGATGVCTVA
CTGGCAGNCTGCCA--
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGCCTGATGVCTVA
ATGGGGTGAT------
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGGCCTGATGVCTVA
CTTGGCANNNTGCCAA-
 A C G T A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTGATGVCTVA
TTGGCATGGTGCCA--
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTGATGVCTVA
ATGGGGTGAT------
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGGCCTGATGVCTVA
GGTCTGGCAT---------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGGCCTGATGVCTVA
GTGGCGTGACNG----
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTGGCCTGATGVCTVA-
--------ATGACTCAT
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

NFE2/MA0841.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CTGGCCTGATGVCTVA--
-------CATGACTCATC
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGCCTGATGVCTVA
TTGGCA----------
 A G T C A C G T A C T G A C T G A T G C A G T C C G A T A T C G C G T A A C G T A T C G T C G A A T G C A C G T T A G C G T C A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T