Information for 5-ACTACGANTC (Motif 9)

C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G A C G T A G T C A C T G A C G T C G T A A C T G A C G T
p-value:1e-11
log p-value:-2.718e+01
Information Content per bp:1.883
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.2 +/- 29.1bp
Average Position of motif in Background48.5 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTACGANTC--
ACTACAATTCCC
 C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACTACGANTC---------
RACTACAACTCCCAGVAKGC
 A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACTACGANTC---------
AACTACAATTCCCAGAATGC
 A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACTACGANTC--
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTACGANTC-----
TTTTACGACTTTCCAT
 A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTACGANTC--
ATTTACGACAAATAGC
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACTACGANTC
NTTTTACGACT-
 A C G T A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ACTACGANTC
GTTAACTAGN----
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:ACTACGANTC--
---ATGACTCAT
 C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C A C G T A C G T
A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACTACGANTC
NTTTTACGACC-
 A C G T A C G T C G T A A G T C A C G T C G T A A G T C C T A G C G T A A G T C A C G T A T G C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T