Information for 3-GCAGGGCAGGGCA (Motif 3)

A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
Reverse Opposite:
G A C T T C A G G T A C T A G C G T A C A C G T A C T G G A T C G A T C T G A C G A C T A T C G G T A C
p-value:1e-16
log p-value:-3.817e+01
Information Content per bp:1.616
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif11.39%
Number of Background Sequences with motif2098.5
Percentage of Background Sequences with motif4.47%
Average Position of motif in Targets51.3 +/- 23.7bp
Average Position of motif in Background49.8 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCAGGGCAGGGCA-
ACATGCCCGGGCAT
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCAGGGCAGGGCA
-TGGGGAAGGGCM
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGCAGGGCA
WDNCTGGGCA-----
 A C G T A C G T A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCAGGGCAGGGCA
--GGGGNGGGGC-
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T

Klf4/MA0039.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGGGCAGGGCA
--TGGGTGGGGC-
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAGGGCAGGGCA
--DGGGYGKGGC-
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCAGGGCAGGGCA
TNNGGGCAG----
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCAGGGCAGGGCA
-GGGGGCGGGGCC
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAGGGCAGGGCA
-MKGGGYGTGGCC
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGGCAGGGCA-
GCCGCGCAGTGCGT
 A C T G T A G C C T G A A C T G C T A G C T A G G T A C T G C A C A T G A T C G C A T G A G T C C T G A A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T