p-value: | 1e-10 |
log p-value: | -2.490e+01 |
Information Content per bp: | 1.770 |
Number of Target Sequences with motif | 49.0 |
Percentage of Target Sequences with motif | 5.52% |
Number of Background Sequences with motif | 849.4 |
Percentage of Background Sequences with motif | 1.81% |
Average Position of motif in Targets | 57.6 +/- 25.3bp |
Average Position of motif in Background | 48.5 +/- 32.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAGKTCAGA --AGGTCA-- |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCAGKTCAGA -CAGGTGAGG |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGKTCAGA TRAGGTCA-- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GCAGKTCAGA CAAAGGTCAG- |
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SD0001.1_at_AC_acceptor/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGKTCAGA-- -CAGGTAAGTAT |
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RORA/MA0071.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGKTCAGA ATCAAGGTCA-- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGKTCAGA-- CGCGCCGGGTCACGTA |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGKTCAGA AGRGGTCA-- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCAGKTCAGA-- --ATGCCAGACN |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCAGKTCAGA----- AGGGGTCAGAGGTCA |
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