Information for 7-CTCCCATTTT (Motif 33)

G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T
Reverse Opposite:
T C G A G C T A C T G A T C G A C G A T T A C G C T A G T C A G T G C A C A T G
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.701
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.91%
Number of Background Sequences with motif1429.0
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets54.5 +/- 25.3bp
Average Position of motif in Background49.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CTCCCATTTT-----
TGTTCCCATTGTGTACT
 A C G T A C G T G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTCCCATTTT-
---CCTTTGTT
 G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTCCCATTTT-
---CCWTTGTY
 G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCCCATTTT--
--NCCATTGTTC
 G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTCCCATTTT-
GCNGCCATCTTG
 A C G T G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCCCATTTT---
---CCATTGTTYB
 G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTCCCATTTT-
AGGAGACCCCCAATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CTCCCATTTT-
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTCCCATTTT--
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCCCATTTT--
--NCCATTGTTY
 G T A C A C G T A G T C G A T C A T G C G C T A A G C T A G C T C G A T A G C T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T