Information for 17-ATGATAACAGCAGACT (Motif 28)

G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T C T A G A T G C C G A T A C T G A G C T C G A T C G T A A C G T A T G C C G T A C A G T
p-value:1e-8
log p-value:-1.973e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 11.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGATAACAGCAGACT
TCNNTTTACAGCGNNNT
 A C G T G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGATAACAGCAGACT
TCNNTTTACAGCGNNNT
 A C G T G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGATAACAGCAGACT
TCNCTTTACAGCGNNNT
 A C G T G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGATAACAGCAGACT
AGAGRRACAGCWGAC-
 G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGATAACAGCAGACT
ATGTCACAACAACAC---
 A C G T A C G T G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGATAACAGCAGACT
ATGATCGAATCAAA--
 G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGATAACAGCAGACT
-AGATAAGA-------
 G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATGATAACAGCAGACT
-AGATAASR-------
 G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGATAACAGCAGACT
TAAACTGATAAGAAGAT---
 A C G T A C G T A C G T A C G T G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ATGATAACAGCAGACT-
---------BCAGACWA
 G T C A A C G T A T C G G T C A A C G T C G T A C T G A A G T C C G T A A T C G A G T C C G T A A C T G G T C A G T A C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A