Information for 12-TCAGGGGAGAATTCAG (Motif 14)

C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
Reverse Opposite:
A G T C A C G T A T C G T G C A T G C A A G C T A C G T A G T C A C G T A G T C A G T C G A T C A G T C C G A T A C T G G C T A
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.694
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets58.8 +/- 18.4bp
Average Position of motif in Background48.2 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
-TAGGGCAAAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
GTAGGGCAAAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
-GAGGTCAAAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
-------AAAAGTCAA
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCAGGGGAGAATTCAG
-TGGGGCAAAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
AGGGGTCAGAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGGAGAATTCAG
CANAGNNCAAAGTCCA-
 A C G T C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
AGAGTCCAAAGTCCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG
-GAGGTCAAAGGTCA-
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGGGGAGAATTCAG---
---GGACTGAATTCATGCC
 C A G T T A G C C G T A C T A G C A T G T C A G A C T G G T C A T C A G C G T A C T G A A C G T A C G T A T G C G T C A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C