Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-233 | -5.366e+02 | 0.0000 | 369.0 | 43.62% | 2461.0 | 5.26% | motif file (matrix) |
svg |
2 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-232 | -5.360e+02 | 0.0000 | 422.0 | 49.88% | 3577.8 | 7.64% | motif file (matrix) |
svg |
3 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-225 | -5.200e+02 | 0.0000 | 459.0 | 54.26% | 4656.7 | 9.95% | motif file (matrix) |
svg |
4 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-204 | -4.704e+02 | 0.0000 | 460.0 | 54.37% | 5278.1 | 11.28% | motif file (matrix) |
svg |
5 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-144 | -3.320e+02 | 0.0000 | 393.0 | 46.45% | 5263.3 | 11.25% | motif file (matrix) |
svg |
6 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-131 | -3.032e+02 | 0.0000 | 472.0 | 55.79% | 8491.3 | 18.14% | motif file (matrix) |
svg |
7 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-102 | -2.349e+02 | 0.0000 | 371.0 | 43.85% | 6324.5 | 13.51% | motif file (matrix) |
svg |
8 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-96 | -2.228e+02 | 0.0000 | 265.0 | 31.32% | 3298.4 | 7.05% | motif file (matrix) |
svg |
9 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-87 | -2.008e+02 | 0.0000 | 577.0 | 68.20% | 16196.5 | 34.61% | motif file (matrix) |
svg |
10 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-64 | -1.489e+02 | 0.0000 | 246.0 | 29.08% | 4063.4 | 8.68% | motif file (matrix) |
svg |
11 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-55 | -1.273e+02 | 0.0000 | 215.0 | 25.41% | 3563.1 | 7.61% | motif file (matrix) |
svg |
12 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-53 | -1.230e+02 | 0.0000 | 211.0 | 24.94% | 3534.3 | 7.55% | motif file (matrix) |
svg |
13 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-49 | -1.133e+02 | 0.0000 | 161.0 | 19.03% | 2258.5 | 4.83% | motif file (matrix) |
svg |
14 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-45 | -1.039e+02 | 0.0000 | 239.0 | 28.25% | 4962.9 | 10.60% | motif file (matrix) |
svg |
15 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-39 | -9.184e+01 | 0.0000 | 168.0 | 19.86% | 2904.7 | 6.21% | motif file (matrix) |
svg |
16 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-23 | -5.422e+01 | 0.0000 | 90.0 | 10.64% | 1415.1 | 3.02% | motif file (matrix) |
svg |
17 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-20 | -4.686e+01 | 0.0000 | 248.0 | 29.31% | 7658.5 | 16.36% | motif file (matrix) |
svg |
18 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-16 | -3.702e+01 | 0.0000 | 79.0 | 9.34% | 1498.3 | 3.20% | motif file (matrix) |
svg |
19 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-14 | -3.314e+01 | 0.0000 | 99.0 | 11.70% | 2304.1 | 4.92% | motif file (matrix) |
svg |
20 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-13 | -3.220e+01 | 0.0000 | 171.0 | 20.21% | 5195.4 | 11.10% | motif file (matrix) |
svg |
21 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-10 | -2.365e+01 | 0.0000 | 211.0 | 24.94% | 7586.7 | 16.21% | motif file (matrix) |
svg |
22 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-9 | -2.105e+01 | 0.0000 | 23.0 | 2.72% | 255.7 | 0.55% | motif file (matrix) |
svg |
23 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-8 | -1.984e+01 | 0.0000 | 24.0 | 2.84% | 296.1 | 0.63% | motif file (matrix) |
svg |
24 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-7 | -1.710e+01 | 0.0000 | 113.0 | 13.36% | 3690.8 | 7.89% | motif file (matrix) |
svg |
25 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.466e+01 | 0.0000 | 146.0 | 17.26% | 5371.8 | 11.48% | motif file (matrix) |
svg |
26 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-6 | -1.404e+01 | 0.0000 | 238.0 | 28.13% | 9879.5 | 21.11% | motif file (matrix) |
svg |
27 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.326e+01 | 0.0000 | 173.0 | 20.45% | 6788.4 | 14.50% | motif file (matrix) |
svg |
28 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-5 | -1.324e+01 | 0.0000 | 22.0 | 2.60% | 368.6 | 0.79% | motif file (matrix) |
svg |
29 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.287e+01 | 0.0000 | 28.0 | 3.31% | 563.4 | 1.20% | motif file (matrix) |
svg |
30 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-5 | -1.249e+01 | 0.0000 | 7.0 | 0.83% | 34.1 | 0.07% | motif file (matrix) |
svg |
31 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-5 | -1.165e+01 | 0.0001 | 109.0 | 12.88% | 3955.4 | 8.45% | motif file (matrix) |
svg |
32 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.155e+01 | 0.0001 | 33.0 | 3.90% | 780.0 | 1.67% | motif file (matrix) |
svg |
33 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.141e+01 | 0.0001 | 25.0 | 2.96% | 510.4 | 1.09% | motif file (matrix) |
svg |
34 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.064e+01 | 0.0003 | 239.0 | 28.25% | 10400.2 | 22.22% | motif file (matrix) |
svg |
35 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-4 | -1.002e+01 | 0.0005 | 22.0 | 2.60% | 455.1 | 0.97% | motif file (matrix) |
svg |
36 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-4 | -9.254e+00 | 0.0010 | 42.0 | 4.96% | 1231.4 | 2.63% | motif file (matrix) |
svg |
37 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -8.479e+00 | 0.0020 | 11.0 | 1.30% | 160.4 | 0.34% | motif file (matrix) |
svg |
38 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.402e+00 | 0.0021 | 48.0 | 5.67% | 1532.6 | 3.27% | motif file (matrix) |
svg |
39 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -8.212e+00 | 0.0025 | 22.0 | 2.60% | 518.3 | 1.11% | motif file (matrix) |
svg |
40 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.601e+00 | 0.0045 | 41.0 | 4.85% | 1293.2 | 2.76% | motif file (matrix) |
svg |
41 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -7.035e+00 | 0.0078 | 69.0 | 8.16% | 2574.7 | 5.50% | motif file (matrix) |
svg |
42 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -6.957e+00 | 0.0083 | 35.0 | 4.14% | 1086.7 | 2.32% | motif file (matrix) |
svg |
43 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.801e+00 | 0.0094 | 97.0 | 11.47% | 3915.5 | 8.37% | motif file (matrix) |
svg |
44 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.775e+00 | 0.0094 | 82.0 | 9.69% | 3206.5 | 6.85% | motif file (matrix) |
svg |
45 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -6.718e+00 | 0.0098 | 17.0 | 2.01% | 398.0 | 0.85% | motif file (matrix) |
svg |
46 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.460e+00 | 0.0124 | 96.0 | 11.35% | 3911.8 | 8.36% | motif file (matrix) |
svg |
47 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-2 | -6.258e+00 | 0.0148 | 47.0 | 5.56% | 1654.9 | 3.54% | motif file (matrix) |
svg |
48 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -6.179e+00 | 0.0157 | 8.0 | 0.95% | 123.6 | 0.26% | motif file (matrix) |
svg |
49 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.079e+00 | 0.0170 | 41.0 | 4.85% | 1405.5 | 3.00% | motif file (matrix) |
svg |
50 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -5.936e+00 | 0.0192 | 32.0 | 3.78% | 1030.0 | 2.20% | motif file (matrix) |
svg |
51 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.822e+00 | 0.0211 | 35.0 | 4.14% | 1165.1 | 2.49% | motif file (matrix) |
svg |
52 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -5.793e+00 | 0.0213 | 53.0 | 6.26% | 1968.0 | 4.20% | motif file (matrix) |
svg |
53 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -5.747e+00 | 0.0219 | 31.0 | 3.66% | 1001.0 | 2.14% | motif file (matrix) |
svg |
54 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.561e+00 | 0.0259 | 46.0 | 5.44% | 1672.2 | 3.57% | motif file (matrix) |
svg |
55 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.140e+00 | 0.0388 | 87.0 | 10.28% | 3657.8 | 7.82% | motif file (matrix) |
svg |
56 |
| PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer | 1e-2 | -5.085e+00 | 0.0402 | 8.0 | 0.95% | 148.4 | 0.32% | motif file (matrix) |
svg |
57 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.980e+00 | 0.0439 | 38.0 | 4.49% | 1366.9 | 2.92% | motif file (matrix) |
svg |
58 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -4.876e+00 | 0.0479 | 34.0 | 4.02% | 1197.1 | 2.56% | motif file (matrix) |
svg |
59 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.830e+00 | 0.0493 | 205.0 | 24.23% | 9716.3 | 20.76% | motif file (matrix) |
svg |
60 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -4.630e+00 | 0.0592 | 94.0 | 11.11% | 4080.3 | 8.72% | motif file (matrix) |
svg |