Information for 5-AVAMAGATTTSTC (Motif 7)

G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
Reverse Opposite:
A T C G G C T A T A G C G C T A G T C A C T G A A G C T G T A C G A C T C A T G G C A T A C T G C G A T
p-value:1e-12
log p-value:-2.823e+01
Information Content per bp:1.610
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif584.3
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets51.9 +/- 24.4bp
Average Position of motif in Background49.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AVAMAGATTTSTC
-CNGTGATTTN--
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AVAMAGATTTSTC----
NNNCTGATATCTCNNNN
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AVAMAGATTTSTC
ACAAAGGNBCCT-
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AVAMAGATTTSTC
--AAGGATATNTN
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AVAMAGATTTSTC--
----TGATTTATGGC
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AVAMAGATTTSTC---
TNNNATGATTTCNNCNN
 A C G T G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AVAMAGATTTSTC---
----TGATTTATGGCC
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AVAMAGATTTSTC
ACAAAG-------
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AVAMAGATTTSTC
CATCCAGATGTTC-
 A C G T G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AVAMAGATTTSTC---
---NTGATTTATGGCC
 G C T A T G A C C G T A G T A C C T G A A C T G T C G A G A C T A C G T C G A T A T C G C G A T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C